Insertion junction: CLIP2.048809_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048809
Chromosome:chromosome 6
Location:8364527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307700 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCGGCAGCACAACTCCGTGACAGAAATGCCGATTGGTAAGTTTTCTA
Internal bar code:GGCGTGAGAACTACAAAAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:961
LEAP-Seq percent confirming:79.1667
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCTGCCTTCCCGATATT
Suggested primer 2:TCCACGATGTCCCAGGATCT