Insertion junction: CLIP2.048822_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048822
Chromosome:chromosome 1
Location:5012511
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g034800 (1 of 1) PTHR21477//PTHR21477:SF12 - FAMILY NOT NAMED // CF9 PROTEIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGCCAGCATCGCCAAGCAGGAGCACCGCGACGCGCTGACGGACGTGC
Internal bar code:CCGGGTTTAATCAACTGGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:535
LEAP-Seq percent confirming:44.186
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGGCCTGAACCTAGTGT
Suggested primer 2:GGTACCAACAGAATCGGGCA