Insertion junction: CLIP2.048829_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.048829
Chromosome:chromosome 2
Location:6445440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388500 (1 of 13) PF09273 - Rubisco LSMT substrate-binding (Rubis-subs-bind) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAAGGGCTGCGTCATGGGCGTTTGTGTCATCGCTTGTCCTGTGGCTGG
Internal bar code:ACTCCGGAAAGGGATGGACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1326
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAGTCCTCCAACAGCTT
Suggested primer 2:GCAGCATCACCAGCATCATG