Insertion junction: CLIP2.048840_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048840
Chromosome:chromosome 1
Location:4778617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033150 (1 of 2) PTHR31385//PTHR31385:SF1 - FAMILY NOT NAMED // EXPRESSED PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAGCAGCGTTCGCCTAGATTCAGTTGTGCAAGGTTACGTGGGCCCCAC
Internal bar code:CTTGTGTGGGGCAGAATGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1863
LEAP-Seq percent confirming:93.617
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTTATCAGATAGCCCGT
Suggested primer 2:AGCAGTTGGATGTGAGACCG