Insertion junction: CLIP2.048842_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048842
Chromosome:chromosome 12
Location:3028858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801386 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAAAACTAGCACAAGGTAGGTTCTAGGACAGCTACCAACTAACTCGTG
Internal bar code:GTGAGCAGAAGCCATTTTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2528
LEAP-Seq percent confirming:73.4694
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTCAGTGCTGTGCTCTT
Suggested primer 2:CCATCTCCATGTCGACCTCG