Insertion junction: CLIP2.048845_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048845
Chromosome:chromosome 6
Location:8876729
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g311700 FAP349 Leucine-Rich Repeat Flagellar Associated Protein 349 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCTGAATGCGCTGCTGCTCCACGAGCCGCTGCTGCTCCGCCCTTTCT
Internal bar code:AGACTAGGTAGTTTCTCGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:788
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCATGATTTGAGACTGG
Suggested primer 2:CATTGGCCACCCATACCCTT