Insertion junction: CLIP2.048847_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048847
Chromosome:chromosome 3
Location:4496027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175750 (1 of 1) PTHR12461:SF2 - JMJC DOMAIN-CONTAINING PROTEIN 7 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGTTGGATGGCCGCTGGGAACTGGAACACGAGGGGAGGACGGTGGGGG
Internal bar code:CGGCCGGCTGGTAGTGACAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:249
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTGCTACCACTCGCAAA
Suggested primer 2:AGTGCTAAGTTGCCCCTGAC