Insertion junction: CLIP2.048848_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048848
Chromosome:chromosome 2
Location:2407957
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g091200 (1 of 1) 1.13.11.5 - Homogentisate 1,2-dioxygenase / Homogentisicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGCCTGCAGCGCCGAGCAGTGTGGTGCGGCGTGGCGCAGTGCAGGGT
Internal bar code:GTTTCGTTTTCGTTAGAAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1757
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCTTCAGGTCCGGTGAC
Suggested primer 2:GGCCTTGAATGTTGGGAGGA