Insertion junction: CLIP2.048855_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048855
Chromosome:chromosome 5
Location:2592870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239750 ARS13 (1 of 2) IPR002591//IPR017849//IPR017850 - Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase // Alkaline phosphatase-like, alpha/beta/alpha // Alkaline-phosphatase-like, core domain; Arylsulfatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAAGCTGGAGGGTTGCGACACCGCGCCACACAGAGCCAGTAAGGGTAT
Internal bar code:CGGGGGAAGCTTGGTACCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3528
LEAP-Seq percent confirming:86.7769
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:121

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGCAGCTGGTACGATGC
Suggested primer 2:GTTGTCAGGCAAGCACAAGG