Insertion junction: CLIP2.048858_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048858
Chromosome:chromosome 1
Location:1418939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007500 NSS1 (1 of 2) PTHR11819//PTHR11819:SF12 - SODIUM/SOLUTE SYMPORTER // HIGH-AFFINITY CHOLINE TRANSPORTER 1; Sodium:solute symporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACACACACACACACACACACACACACACACACACACACACACACA
Internal bar code:CATATTTTCTCGTGTAGTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2248
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CATGAAGGCGCCATACTTGC
Suggested primer 2:CACGTGTGTGTGCTTGAAGG