Insertion junction: CLIP2.048861_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048861
Chromosome:chromosome 6
Location:2774509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271450 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCATGCCGCGTGCGCCAGGGGGGGAGGCGGGAACTCGCTGCGGCCGT
Internal bar code:AGCCTTGCCTCGGGGCGTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1874
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTTCACCACTAGTGCGT
Suggested primer 2:GCCGTCTGCCTAACTTCCAT