Insertion junction: CLIP2.048864_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048864
Chromosome:chromosome 12
Location:2925207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502500 ELG34 Exostosin-like glycosyltransferase 34; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGTTTAGGCTAGCAGCACTCGCCAATCCAGGCGGCTGGTGCGGTGGG
Internal bar code:CTACCTGCGCCCGATTGCAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3188
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGGCCCTGGTTTGACAA
Suggested primer 2:CTGAAGAGGAAGGTGCCGTT