Insertion junction: CLIP2.048868_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048868
Chromosome:chromosome 13
Location:2579403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580600 ATT1,ATE1 Arginyl-tRNA protein transferase; (1 of 1) 2.3.2.8 - Arginyltransferase / Arginyl-tRNA--protein transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCATCCCTCCCCTGCCATCCCTCCTCTTGCCATCGCTCCTCTGCCATC
Internal bar code:AGATCTGGTTGATTTAATGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1209
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTTTCCGTTCCTGTCTG
Suggested primer 2:ACATCGGCATTGACTCTGCA