Insertion junction: CLIP2.048878_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048878
Chromosome:chromosome 1
Location:6115126
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043400 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTCCTGAAGGAGGCGCAGCAGGAGATCGCGCTGCTGCGGACCGACTT
Internal bar code:TGCTCACTTTCATTTTGATCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3354
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGAGGAGGAGGATGCGG
Suggested primer 2:GCTGGTATGCGCCTCAAAAG