Insertion junction: CLIP2.048881_5

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048881
Chromosome:chromosome 17
Location:2051067
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g711100 (1 of 1) PTHR22881//PTHR22881:SF11 - BROMODOMAIN CONTAINING PROTEIN // PROTEIN SWSN-9, ISOFORM A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTTTTGACAATCGTTCGGGACCAGCGCCCGTCGGCTTCGTTAGCATG
Internal bar code:TGGTCTCGGTATCGGTTCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:78
LEAP-Seq percent confirming:7.69231
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACAGGAACGTTGTCCAG
Suggested primer 2:AGCTGCAGGACACGTACAAG