Insertion junction: CLIP2.048884_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048884
Chromosome:chromosome 12
Location:3532968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496500 PHC70 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCGGCACCAGGTGTGCCTGGAACTTGCGTCCGGGGCGACACTGGCGG
Internal bar code:GGCAATAATTACGCTACAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2265
LEAP-Seq percent confirming:86.747
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAACCAACCAACGGAGAC
Suggested primer 2:CGGCCAGGTCTGTCTAAAGG