Insertion junction: CLIP2.048886_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048886
Chromosome:chromosome 12
Location:1519098
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGGCGTGTGGGGTGGCCGGACGCCCGGCCACCGTGTGGCCCGCCCGG
Internal bar code:GGTTGTCGCGGGCTCCCTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1463
LEAP-Seq percent confirming:35.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCAATACGAAGCAACCG
Suggested primer 2:AGGTGTGGTGCTGAAGACTG