Insertion junction: CLIP2.048887_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048887
Chromosome:chromosome 9
Location:3322062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395362 (1 of 4) 1.13.11.75 - All-trans-8'-apo-beta-carotenal 15,15'-oxygenase / 8'-apo-beta-carotenal 15,15'-oxygenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGCCACCACGTAGAACTTGTCCGTCACCCAGAAGTCCAGCACCCCC
Internal bar code:AGAATTAGTTAAGCCTGTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:588
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATCCAACGCCTGCATCT
Suggested primer 2:ATGATGACGCAGGTGGTGAG