Insertion junction: CLIP2.048899_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048899
Chromosome:chromosome 3
Location:7996620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201850 SRH10 (1 of 2) K10877 - DNA repair and recombination protein RAD54B (RAD54B); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAAACTGGGCGCGAGTCATGGCAGACTGTGCGGAGCAGTACTACTTCA
Internal bar code:CTATAGATTCTGGTTATCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1893
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCGCAAAGAAGAAGAAA
Suggested primer 2:TTTTTCCTCGATGGACCCGG