Insertion junction: CLIP2.048906_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048906
Chromosome:chromosome 6
Location:5431826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285750 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCGAGAGAGCGCCGACGCCTTGCTGCAGCGATTCATAGACGTGTGGA
Internal bar code:GGTTTGGGGTCCAAACTCTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1616
LEAP-Seq percent confirming:69.5652
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAATCAGAAGGCTGGGCT
Suggested primer 2:AGTGGTTGCACGTCAAATGC