Insertion junction: CLIP2.048914_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048914
Chromosome:chromosome 16
Location:4485192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667700 (1 of 3) IPR000104//IPR005069 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCGGCGGCGGCGGGATGGTAGCTGGCGGCGGCGGCGTCATGGGCGGC
Internal bar code:CCGATTCAACATGTTTTTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:175
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTTGTTCAACTGGGCAC
Suggested primer 2:TGTCACAGATATCGGCAGCG