Insertion junction: CLIP2.048918_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048918
Chromosome:chromosome 1
Location:3734872
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024350 (1 of 2) PTHR10766//PTHR10766:SF49 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTTCCCTGAAATACGTGAGGTGCGCCCGATCACACCGGTCCCAGAAC
Internal bar code:TAAACTTATGCTGAATGTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2444
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGTGCGTAGGGCTATTC
Suggested primer 2:TGAAGTGCAGCAAACATGCC