Insertion junction: CLIP2.048927_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048927
Chromosome:chromosome 7
Location:1426534
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323350 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGTATGTTGGAGGTCAGGGCGCTGCAAAACCACTGCGACGGCTCCCT
Internal bar code:AATAGTAAATCGCGTTGTACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1324
LEAP-Seq percent confirming:15.9091
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGTAGAGGGAAGGGTCT
Suggested primer 2:GCGAATTGTTGCCATAGCCA