Insertion junction: CLIP2.048927_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048927
Chromosome:chromosome 7
Location:1426550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323350 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCAACATACAGCTCTGCCTCGCGGAGCAGCCCTGGCCCGGACACGAC
Internal bar code:GGGGGGAAGGCCGGGATTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4454
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAATTGTTGCCATAGCCA
Suggested primer 2:GACGGTAGAGGGAAGGGTCT