Insertion junction: CLIP2.048929_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048929
Chromosome:chromosome 6
Location:453120
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g252100 (1 of 1) PTHR12389:SF0 - E3 UBIQUITIN-PROTEIN LIGASE LISTERIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGGCACGAGCGGGTGCAGGCTGCCTGCTGCGCCGCACTGGCACAGCTC
Internal bar code:GTCGGTTACGCTTAAAGTTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2827
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGGTAGGGCTCAAAGG
Suggested primer 2:GTCGTGCATGTTGGCTGTAC