Insertion junction: CLIP2.048930_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048930
Chromosome:chromosome 12
Location:1125849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g491000 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACCGCGCCAGTAATCCTTGCGGAATTACTACCGGTGCAACAACCTCA
Internal bar code:GTTATCTGGTTTAAATCCGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:638
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAGAGAGGGAGTGAGAG
Suggested primer 2:CGTGTAGGTTTCCAAGGGCT