Insertion junction: CLIP2.048935_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048935
Chromosome:chromosome 9
Location:4076741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399104 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATGCCCGGTGTTTGGCCAGCCAACTGGGTGAACCCGGGAGTGCGATA
Internal bar code:AGCTGTTGGAGGCGCGCGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1720
LEAP-Seq percent confirming:75.641
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:TATTGTGCCAGCATGCCTGA
Suggested primer 2:GTCAGGTGGTCAGATGGGTG