Insertion junction: CLIP2.048940_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048940
Chromosome:chromosome 16
Location:6243230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676400 HEL63 (1 of 1) K12811 - ATP-dependent RNA helicase DDX46/PRP5 (DDX46, PRP5); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAGCCCCCCCCGAAAAAACGTGTATCCACGGCCGCACGCACCTGCAGG
Internal bar code:TGAAAGACAGATAAGACCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1868
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGGTGGTGAACTACGA
Suggested primer 2:CCGACGACCCTATGTGTAGC