Insertion junction: CLIP2.048941_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048941
Chromosome:chromosome 17
Location:2866295
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718800 MPA14 calcineurin-like phosphoesterase family protein; (1 of 3) PTHR11668//PTHR11668:SF267 - SERINE/THREONINE PROTEIN PHOSPHATASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATACTTGTGGAGGCCGGGAATGAACGAGTTATGTCGCCGTTTGGAAGGG
Internal bar code:AGAGGGTCATAATGACGTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2832
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATGATATGTCGTGCGGA
Suggested primer 2:GGTTCTCAAGGACGGACAGG