Insertion junction: CLIP2.048947_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048947
Chromosome:chromosome 9
Location:5012561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g405650 (1 of 1) PTHR12794:SF0 - GEM-ASSOCIATED PROTEIN 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGCCCCACCCGGTGACCCGGCTGCCCCACCGCCCCTGCACCCACCTT
Internal bar code:TCACATGTTATCAATGCTGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:132
LEAP-Seq percent confirming:32.2581
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCAAAACACCTTTCGAGC
Suggested primer 2:CCAGCGGTTTGTCCTGTTTG