Insertion junction: CLIP2.048949_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.048949
Chromosome:chromosome 17
Location:6623626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745597 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGAAACTCGCGCCTCGATTTTTGTCCTTCTGTAGCATCGTGAACTACC
Internal bar code:CTTCGATCTTCCAGTGCGGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1199
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCATCGCAGAAATGGCCG
Suggested primer 2:ATGAATGGGATGGGGCGTTT