Insertion junction: CLIP2.048957_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048957
Chromosome:chromosome 4
Location:2776729
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223700 (1 of 2) K07735 - putative transcriptional regulator (algH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACTGAACACGACCCGCACATTTGTCGAAAAGACTCTCACTACTAACA
Internal bar code:TGACAAGGCAATGGGAGGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1354
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGGCTCGGACATCAATT
Suggested primer 2:AAGGCATGGCGATGTGGTAA