Insertion junction: CLIP2.048958_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048958
Chromosome:chromosome 17
Location:2659192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716850 (1 of 1) PTHR23327//PTHR23327:SF9 - RING FINGER PROTEIN 127 // ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCACCGCGAGCCAGTGTTGCGGGGGCGACCCGCCTGCCGCACAGCGCG
Internal bar code:TCTTGTTCAGTAAGAAACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1620
LEAP-Seq percent confirming:65.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAGGGTTCTGCCGATGT
Suggested primer 2:TCCCGACCATCTGACCTCAT