Insertion junction: CLIP2.048981_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048981
Chromosome:chromosome 3
Location:1236525
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149650 CCD1 related to carotenoid 9%252C10-9'%252C10' cleavage dioxygenase; (1 of 1) K11159 - carotenoid cleavage dioxygenase (K11159) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGGACGGAGAGGAGGCGGGAGGGAGGGAGGGAGGGAGAGGCCGGGG
Internal bar code:TTTCAGCATGGATGGGGCACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:454
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCTTACTATGCGCACAC
Suggested primer 2:GTGCCATCGACCATAAACGC