Insertion junction: CLIP2.048986_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048986
Chromosome:chromosome 1
Location:6131704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043550 (1 of 3) IPR000104//IPR004333 - Antifreeze protein, type I // Transcription factor, SBP-box intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGATTGGTTGTATGTGCAACCCCCCGGCGCGCTGCACGTAGTAGTTC
Internal bar code:TATCTAGGACCCAATGGAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3083
LEAP-Seq percent confirming:60.8696
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGATTGGCGCACATCCC
Suggested primer 2:GCGGGGGTTGATACTCTACG