Insertion junction: CLIP2.048993_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048993
Chromosome:chromosome 1
Location:3335447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021550 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACGAGGGCCGCAGCAATAAGTCGGTAAGCATGGCCACGCCGTAGGCT
Internal bar code:GACTAGTAGTTGTAATGCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:698
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TACACGAGTATCCGGGGGAG
Suggested primer 2:GGATGCAACTCTCCAGACCC