Insertion junction: CLIP2.048996_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048996
Chromosome:chromosome 16
Location:5736364
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680700 (1 of 4) 6.3.5.4 - Asparagine synthase (glutamine-hydrolyzing) / Glutamine-dependent asparagine synthetase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGTGGCGCCCTCCGTTCCGAAGCCTCGAGAGCTTGCAAATGTCGCGA
Internal bar code:CGGAGAGGTTGCCTCTCAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3486
LEAP-Seq percent confirming:56.6667
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGCCACAGCCCTAAACT
Suggested primer 2:CTCAGCGTACGAGCAGTAGG