Insertion junction: CLIP2.048996_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048996
Chromosome:chromosome 16
Location:5736367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680700 (1 of 4) 6.3.5.4 - Asparagine synthase (glutamine-hydrolyzing) / Glutamine-dependent asparagine synthetase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTTCTGCACATGCTAGCAGTGTTTGGCCGCGAGACGGCCCACCCTCC
Internal bar code:GTGCATGCCCAGTGCACCCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:904
LEAP-Seq percent confirming:43.75
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGCGTACGAGCAGTAGG
Suggested primer 2:GGATGCCACAGCCCTAAACT