Insertion junction: CLIP2.048997_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048997
Chromosome:chromosome 10
Location:1548620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428750 (1 of 1) K14792 - rRNA biogenesis protein RRP5 (RRP5, PDCD11) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGAAGGAGGAGGGCGACGATGCCAGCGTGGAGCATGTGAAGCGGCGTG
Internal bar code:TGCATACGTATCGTGGGGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4426
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTTGCCACAGGACAAG
Suggested primer 2:TCTTATCTGATCCCACGCGC