Insertion junction: CLIP2.048999_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048999
Chromosome:chromosome 6
Location:2382030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268450 (1 of 1) PTHR22850//PTHR22850:SF85 - WD40 REPEAT FAMILY // WD-40 REPEAT-CONTAINING PROTEIN MSI4-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTTGGTTGTGTGTGCGTTCGTATTTACTTGTGTGTGTATGTGTGCGT
Internal bar code:AAGTGCCTACCTCGAGGATCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:271
LEAP-Seq percent confirming:87.0968
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACTGCACTGTTAGGCAC
Suggested primer 2:CAAGGGCAAGAAGGAGGAGG