Insertion junction: CLIP2.049000_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049000
Chromosome:chromosome 14
Location:2481443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624000 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGGCGGCGGGGGCGGCGGTGCCAGGCCATGCGGCGGTCGCAGGTTCA
Internal bar code:GTCGCCGGGAGGTGCCTTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1634
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATCAACTTTTGTGGCCG
Suggested primer 2:CATAATTGGAGCCGCAGCAC