Insertion junction: CLIP2.049004_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049004
Chromosome:chromosome 14
Location:1268189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g616250 PCD4,CPL9 Conserved in the Plant Lineage; (1 of 1) PTHR33824//PTHR33824:SF3 - FAMILY NOT NAMED // POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTGTGTTGCTGCCAAGCCGACACGCTTCAGACAGGGCCCGGAGTGCC
Internal bar code:CGACATATCAAGTGATTATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:211
LEAP-Seq percent confirming:2.29885
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:85
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGGAAGGTTCAGGTCCC
Suggested primer 2:GGGCTGACTGGTCACAATCA