Insertion junction: CLIP2.049007_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049007
Chromosome:chromosome 8
Location:3623440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379800 (1 of 1) PF00207//PF07974 - Alpha-2-macroglobulin family (A2M) // EGF-like domain (EGF_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGGCACACCCAGCAACACAGCGCTGGACGTCAACACCACGTGCGCCG
Internal bar code:CTACTAAAGTTATTTACGCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2188
LEAP-Seq percent confirming:75.5556
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTACCTGCGGTGTACA
Suggested primer 2:ACGAGGACCAAAAGCCAGAG