Insertion junction: CLIP2.049007_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049007
Chromosome:chromosome 8
Location:3623441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379800 (1 of 1) PF00207//PF07974 - Alpha-2-macroglobulin family (A2M) // EGF-like domain (EGF_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGCGGCCCCTCCAGGGAGAGGGGCAGCGGGGGCGGGCGACCAGCAGG
Internal bar code:CTACTAAAGTTATTTACGCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:671
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGGACCAAAAGCCAGAG
Suggested primer 2:GTGTGTACCTGCGGTGTACA