Insertion junction: CLIP2.049008_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049008
Chromosome:chromosome 4
Location:3476068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227800 (1 of 1) IPR001480//IPR018392 - Bulb-type lectin domain // LysM domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGACAGCAGGGCTACATATCGACCGTACAATACGAATGACACATCCG
Internal bar code:AAGGGGGCAGTTGGAGACCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:448
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGACAGAGGATTTGTGCA
Suggested primer 2:GCCAAGCAACAGGTGAACAG