Insertion junction: CLIP2.049010_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049010
Chromosome:chromosome 1
Location:516467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003100 (1 of 1) IPR001623//IPR011011 - DnaJ domain // Zinc finger, FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCCCCTCCCCAGCCAGCGATCCGTGGCTGCGATGCGCCTGATGAACCA
Internal bar code:AGGAGCTAACATTACCAGAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:905
LEAP-Seq percent confirming:6.52174
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGAACCACCCGCAAGTGA
Suggested primer 2:AAGCTGCAGAAGTCCAGTCC