Insertion junction: CLIP2.049014_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049014
Chromosome:chromosome 3
Location:2765642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161550 FAP55 (1 of 1) IPR009053//IPR023220 - Prefoldin // Type IV secretion system, VirB5-domain; Flagellar Associated Protein 55 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCAGCGCTGCCACCTGCGCCGCCAACGCCGCCACGCGGCCCCTCAGC
Internal bar code:AATTCGTTAGCGGTTTGAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5725
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGGAGCTGTACGGCAAG
Suggested primer 2:TTCAGAGAGGAGGAGGAGGC