Insertion junction: CLIP2.049014_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049014
Chromosome:chromosome 3
Location:2765747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161550 FAP55 (1 of 1) IPR009053//IPR023220 - Prefoldin // Type IV secretion system, VirB5-domain; Flagellar Associated Protein 55 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACGAGGTGAAGGCGGGTGATGGCGACAGCGACCTGGCAGCGGGGCTG
Internal bar code:AATTCGTTAGCGGTTTGAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:768
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGAGAGGAGGAGGAGGC
Suggested primer 2:TGAAGGAGCTGTACGGCAAG