Insertion junction: CLIP2.049017_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049017
Chromosome:chromosome 17
Location:4012709
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728400 (1 of 2) PTHR19241:SF62 - PROTEIN SCARLET intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACACCCAGGTGAACGGCTGCAGCTGCTGGACGGCGTCAGCGGCGCCCT
Internal bar code:ATCCTATGGGGTTGATAGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:662
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACAGACACGT
Suggested primer 2:TTGGTGTTTGTGTTCCGGGA