Insertion junction: CLIP2.049017_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049017
Chromosome:chromosome 17
Location:4012735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728400 (1 of 2) PTHR19241:SF62 - PROTEIN SCARLET intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGGGGTGCCGGTGTGGCAGCAGGCAGGTGCGTGCGGGGCGAGTGGG
Internal bar code:ATCCTATGGGGTTGATAGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1944
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTGTTTGTGTTCCGGGA
Suggested primer 2:ACACACACACACAGACACGT